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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852848.1_cds_XP_016512003.1_24690
CDS Infomation

[gene=LOC107829085] [db_xref=GeneID:107829085] [protein=exopolygalacturonase-like] [protein_id=XP_016512003.1] [location=complement(join(55263..55505,56019..56531,56844..57152,57885..58016))] [gbkey=CDS]
Sequence

ATGGCTTCAATATCTAGTTTCGGAATAGCCTTTGTATTAGGCCTTATTCTTGGGTGCAGT
AGTGCAGAGGATAAGCTCTTCAATGTCCAATCCTATGGTGCTAAAGCAGATGGAATGACA
GATAATAGTAAGGCATTCTTGAGTACTTGGAAGGATGCATGCCAATGGAGTGGAACAGCC
AAATTCTTGATACCTTCAGGGGAATACTTGGTATATGCTGCAAATTTTATTGGACCATGC
AGTGGATCCATAACCTTCCAAATCCAAGGGGTTGTTAAAGCTCCAACAGATCCTTCTCTA
TTCTGCAATTCGACTTGGATTTCCTTTCAATATGTGAATGGCTTAGAGATTGAAGGAGGC
GGAACTTTAGATGGACAAGGGGCTTCAGCTTGGCCTTATTTTGATACTTCCAAGAATTCT
AACTGCCCAGCCCTTCCTATCACACTGAAATTAGATTCTATCAAAAATGCGGCGGTGCAC
GACATACACTCAATCAATAGCAAGAGTTTCCATTATGGCGTCTTTATGTGCAATAACGTG
ACATTTAGTCATGTTAACCTAACCGCACCAGGCGACAGCCCTAACACCGACGGCATTCAC
ATGAGCGTCTCCACCAACATTCAAGTTTTGGATTCCAACATTGGCACCGGAGACGATTGT
ATATCTATGATCAATGGCAGCCAAAGCATCAACATTTCAGGAATAACTTGTGGCCCTGGC
CATGGAATAAGCATCGGAAGCTTAGGGAAAATACAAAATGAAGTCGTCACAGACGTACAC
GTCAAAAATTGCACTCTCATTGCTACTCAAAATGGCGCCAGGATTAAGACTTGGGCACCA
TCGGAGTCTGGTAGTGCCACAAGTATAAATTTTGAGGATATTTTCATGGATAATGTTAGA
AATCCTATCATTATTGATCAGCATTATTGTTCATCGCCTCCTTGCAGCAGTCAGGCGAGC
TCAGTGCAAATCAAAGACGTGACATTCAATAACATAAGAGGAACTTCAAGTTCAATGGCA
GCTGTTACTTTGAATTGCAGTGCTTCATTTCCTTGCCAGGGAATCAACCTTAGTGAAATC
AATTTGGTATACAATGGAGCTGGTGGACCCGCTGTCTCGTCGTGTGATAATGCCCACGGG
ACTGCCACCGGCATGGAGTTGCCTCCAAGTTGTTTAAAATCGTCTCTTGATTCATGA

Peptide Sequence

PEP ID

XP_016512003.1
PEP Infomation

PREDICTED: exopolygalacturonase-like [Nicotiana tabacum]
Sequence

MASISSFGIAFVLGLILGCSSAEDKLFNVQSYGAKADGMTDNSKAFLSTWKDACQWSGTA
KFLIPSGEYLVYAANFIGPCSGSITFQIQGVVKAPTDPSLFCNSTWISFQYVNGLEIEGG
GTLDGQGASAWPYFDTSKNSNCPALPITLKLDSIKNAAVHDIHSINSKSFHYGVFMCNNV
TFSHVNLTAPGDSPNTDGIHMSVSTNIQVLDSNIGTGDDCISMINGSQSINISGITCGPG
HGISIGSLGKIQNEVVTDVHVKNCTLIATQNGARIKTWAPSESGSATSINFEDIFMDNVR
NPIIIDQHYCSSPPCSSQASSVQIKDVTFNNIRGTSSSMAAVTLNCSASFPCQGINLSEI
NLVYNGAGGPAVSSCDNAHGTATGMELPPSCLKSSLDS

Transcript Sequence

Gene sequence data has not been registered.